BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006B05SP1|AL425476
(807 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1783 1456 0.0
>3x_Contig1783
Length = 22123
Score = 1456 bits (727), Expect = 0.0
Identities = 777/798 (97%), Gaps = 4/798 (0%)
Strand = Plus / Plus
Query: 11 agggtaacaccgcgatcgtttccgtggaagttcctcggatctctcagcccaggccaggcc 70
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 9969 agggtaacaccgcgatcgtttccgtggaagtacctcggatctctcagcccaggccaggcc 10028
Query: 71 aatcccttcccagggtaacgccagatcatgattttmaaamaaaacaacaactatgtaagt 130
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct: 10029 aatcccttcccagggtaacgccagatcatgattttaaaaaaaaacaacaactatgtaagt 10088
Query: 131 cgtggtgtcccatcacatgaccagaaaatggagaaatttcgacgttttcttttcagtacc 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10089 cgtggtgtcccatcacatgaccagaaaatggagaaatttcgacgttttcttttcagtacc 10148
Query: 191 ggcaaaacaattgctgattctccgggtttattgcataatgcactgtcgcgcgacgcg--r 248
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10149 ggcaaaacaattgctgattctccgggtttattgcataatgcactgtcgcgcgacgcgcga 10208
Query: 249 tnnnantagagagagcraaacacacacatacacactacaagagttatcggttaaattccc 308
| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10209 cagtaatagagagagcaaaacacacacatacacactacaagagttatcggttaaattccc 10268
Query: 309 aaagtgcctcttttacaagggctaaccttattgttccagtccgcatgttctccgcagaaa 368
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10269 aaagtgcctctttt-caagggctaaccttattgttccagtccgcatgttctccgcagaaa 10327
Query: 369 aaagttgcatcatctaatcctccattaacggctcacggctagtgagacccttcctcgacc 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10328 aaagttgcatcatctaatcctccattaacggctcacggctagtgagacccttcctcgacc 10387
Query: 429 aataagatttcattgttttctacgcaaaaagaaagacaaaacctaaaarvrragttttct 488
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 10388 aataagatttcattgttttctacgcaaaaagaaagacaaaacctaaaaaaaaagttttct 10447
Query: 489 ttttcacaactacaaaavaacgacacttatttttttaacgtgcgcgtggggacaattacc 548
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10448 ttttcacaactacaaaaaaacgacacttatttttttaacgtgcgcgtggggacaattacc 10507
Query: 549 gcacgcaccgtgcgttngcgcgcgatatatacagamgaggaaaaaccacgggataaactt 608
|||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 10508 gcacgcaccgtgcgtt-gcgcgcgatatatacagaagaggaaaaaccacgggataaactt 10566
Query: 609 gctcctgcgagasaaaagcaatagcgtattttcaaacgcttcgaaaattcttcgaacgca 668
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10567 gctcctgcgagaaaaaagcaatagcgtattttcaaacgcttcgaaaattcttcgaacgca 10626
Query: 669 gctacgatatcttaaatcttttttttgctgcaatattttcgtaacttaataaaaaaaaac 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10627 gctacgatatcttaaatcttttttttgctgcaatattttcgtaacttaataaaaaaaaac 10686
Query: 729 aacctcaatgcgctcccgtaatttctaataaatttttcttttaaattcccatatcgctct 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10687 aacctcaatgcgctcccgtaatttctaataaatttttcttttaaattcccatatcgctct 10746
Query: 789 ctttatatatatactaaa 806
||||||||||||||||||
Sbjct: 10747 ctttatatatatactaaa 10764
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6720
Number of Sequences: 1807
Number of extensions: 6720
Number of successful extensions: 165
Number of sequences better than 1.0e-20: 1
length of query: 807
length of database: 10,358,551
effective HSP length: 16
effective length of query: 791
effective length of database: 10,329,639
effective search space: 8170744449
effective search space used: 8170744449
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.7 bits)